Package: icmm 1.2

icmm: Empirical Bayes Variable Selection via ICM/M Algorithm

Empirical Bayes variable selection via ICM/M algorithm for normal, binary logistic, and Cox's regression. The basic problem is to fit high-dimensional regression which sparse coefficients. This package allows incorporating the Ising prior to capture structure of predictors in the modeling process. More information can be found in the papers listed in the URL below.

Authors:Vitara Pungpapong [aut, cre], Min Zhang [ctb], Dabao Zhang [ctb]

icmm_1.2.tar.gz
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icmm_1.2.tgz(r-4.4-any)icmm_1.2.tgz(r-4.3-any)
icmm_1.2.tar.gz(r-4.5-noble)icmm_1.2.tar.gz(r-4.4-noble)
icmm_1.2.tgz(r-4.4-emscripten)icmm_1.2.tgz(r-4.3-emscripten)
icmm.pdf |icmm.html
icmm/json (API)
NEWS

# Install 'icmm' in R:
install.packages('icmm', repos = c('https://vitara-p.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • initbetaBinomial - Initial values for the regression coefficients used in example for running ICM/M algorithm in binary logistic model
  • initbetaCox - Initial values for the regression coefficients used in example for running ICM/M algorithm in Cox's model
  • initbetaGaussian - Initial values for the regression coefficients used in example for running ICM/M algorithm in normal linear regression model
  • linearrelation - Linear structure of predictors
  • simBinomial - Simulated data from the binary logistic regression model
  • simCox - Simulated data from Cox's regression model
  • simGaussian - Simulated data from the normal linear regression model

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.28 score 19 scripts 166 downloads 12 exports 3 dependencies

Last updated 3 years agofrom:f9f25daed5. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 16 2024
R-4.5-winOKNov 16 2024
R-4.5-linuxOKNov 16 2024
R-4.4-winOKNov 16 2024
R-4.4-macOKNov 16 2024
R-4.3-winOKNov 16 2024
R-4.3-macOKNov 16 2024

Exports:get.abget.alphaget.betaget.beta.isingget.pseudodata.binomialget.pseudodata.coxget.sigmaget.wpostget.wpriorget.zetaget.zeta.isingicmm

Dependencies:EbayesThreshMASSwavethresh